If you're having trouble with the MBR, use the FDISK command with /MBR switch. I thought I had erased a Linux partition, but it would never format. The FDISK command with the above switch clears the MBR and fixed it. It was also good to clear viruses, if your conventional memory in CHKDSK showed anything else but 655,360, you had a virus and this would fix it.
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